publications

2023

1. ACL Findings

   RobustQA: Benchmarking the Robustness of Domain Adaptation for Open-domain Question Answering

   Rujun Han , Peng Qi , Yuhao Zhang, and 6 more authors

   In Findings of the Annual Meeting of the Association for Computational Linguistics (ACL) , 2023

   Bib HTML

   @inproceedings{chen2023improving,
     title = {RobustQA: Benchmarking the Robustness of Domain Adaptation for Open-domain Question Answering},
     author = {Han, Rujun and Qi, Peng and Zhang, Yuhao and Liu, Lan and Burger, Juliette and Wang, William and Huang, Zhiheng and Xiang, Bing and Roth, Dan},
     booktitle = {Findings of the Annual Meeting of the Association for Computational Linguistics (ACL)},
     year = {2023},
   }

2. ACL Findings

   Improving Cross-task Generalization of Unified Table-to-text Models with Compositional Task Configurations

   Jifan Chen , Yuhao Zhang, Lan Liu , and 5 more authors

   In Findings of the Annual Meeting of the Association for Computational Linguistics (ACL) , 2023

   Bib HTML

   @inproceedings{chen2023improvinh,
     title = {Improving Cross-task Generalization of Unified Table-to-text Models with Compositional Task Configurations},
     author = {Chen, Jifan and Zhang, Yuhao and Liu, Lan and Dong, Rui and Chen, Xinchi and Ng, Patrick and Wang, William Yang and Huang, Zhiheng},
     booktitle = {Findings of the Annual Meeting of the Association for Computational Linguistics (ACL)},
     year = {2023},
   }

3. ACL Findings

   Generate then Select: Open-ended Visual Question Answering Guided by World Knowledge

   Xingyu Fu , Sheng Zhang , Gukyeong Kwon , and 10 more authors

   In Findings of the Annual Meeting of the Association for Computational Linguistics (ACL) , 2023

   Bib HTML

   @inproceedings{fu2023generate,
     title = {{Generate then Select: Open-ended Visual Question Answering Guided by World Knowledge}},
     author = {Fu, Xingyu and Zhang, Sheng and Kwon, Gukyeong and Perera, Pramuditha and Zhu, Henghui and Zhang, Yuhao and Li, Alexander Hanbo and Wang, William Yang and Wang, Zhiguo and Castelli, Vittorio and Ng, Patrick and Roth, Dan and Xiang, Bing},
     booktitle = {Findings of the Annual Meeting of the Association for Computational Linguistics (ACL)},
     year = {2023},
   }

4. EMNLP Findings

   Tokenization Consistency Matters for Generative Models on Extractive NLP Tasks

   Kaiser Sun , Peng Qi , Yuhao Zhang, and 3 more authors

   In Findings of EMNLP , 2023

   Bib HTML

   @inproceedings{sun2023tokenization,
     title = {Tokenization Consistency Matters for Generative Models on Extractive NLP Tasks},
     author = {Sun, Kaiser and Qi, Peng and Zhang, Yuhao and Liu, Lan and Wang, William Yang and Huang, Zhiheng},
     booktitle = {Findings of EMNLP},
     year = {2023},
   }

2022

1. MLHC

   Contrastive Learning of Medical Visual Representations from Paired Images and Text

   Yuhao Zhang, Hang Jiang , Yasuhide Miura , and 2 more authors

   In Proceedings of the 7th Machine Learning for Healthcare Conference , 2022

   Bib HTML

   @inproceedings{zhang2022contrastive,
     title = {Contrastive Learning of Medical Visual Representations from Paired Images and Text},
     author = {Zhang, Yuhao and Jiang, Hang and Miura, Yasuhide and Manning, Christopher D and Langlotz, Curtis P},
     booktitle = {Proceedings of the 7th Machine Learning for Healthcare Conference},
     pages = {1--24},
     volume = {182},
     year = {2022},
     series = {Proceedings of Machine Learning Research},
     publisher = {PMLR},
     dataset = {https://github.com/yuhaozhang/convirt},
   }

2021

1. NeurIPS

   RadGraph: Extracting Clinical Entities and Relations from Radiology Reports

   Saahil Jain , Ashwin Agrawal , Adriel Saporta , and 8 more authors

   In Thirty-fifth Conference on Neural Information Processing Systems Datasets and Benchmarks Track (Round 1) , 2021

   Bib HTML

   @inproceedings{jain2021radgraph,
     title = {{RadGraph}: Extracting Clinical Entities and Relations from Radiology Reports},
     author = {Jain, Saahil and Agrawal, Ashwin and Saporta, Adriel and Truong, Steven and Bui, Tan and Chambon, Pierre and Zhang, Yuhao and Lungren, Matthew P and Ng, Andrew Y and Langlotz, Curtis and others},
     booktitle = {Thirty-fifth Conference on Neural Information Processing Systems Datasets and Benchmarks Track (Round 1)},
     year = {2021},
   }

2. Thesis

   Deep Understanding and Generation of Medical Text and Beyond

   Yuhao Zhang

   Stanford University PhD Thesis, 2021

   Bib HTML

   @article{zhang2021deep,
     title = {Deep Understanding and Generation of Medical Text and Beyond},
     author = {Zhang, Yuhao},
     year = {2021},
     journal = {Stanford University PhD Thesis},
     school = {Stanford University},
   }

3. BioNLP

   Overview of the MEDIQA 2021 Shared Task on Summarization in the Medical Domain

   Asma Ben Abacha , Yassine M’rabet , Yuhao Zhang, and 3 more authors

   In Proceedings of the 20th Workshop on Biomedical Language Processing (BioNLP) , 2021

   Bib HTML

   @inproceedings{abacha2021overview,
     title = {Overview of the {MEDIQA} 2021 Shared Task on Summarization in the Medical Domain},
     author = {Abacha, Asma Ben and M’rabet, Yassine and Zhang, Yuhao and Shivade, Chaitanya and Langlotz, Curtis and Demner-Fushman, Dina},
     booktitle = {Proceedings of the 20th Workshop on Biomedical Language Processing (BioNLP)},
     year = {2021},
   }

4. JAMIA

   Biomedical and Clinical English Model Packages for the Stanza Python NLP Library

   Yuhao Zhang, Yuhui Zhang , Peng Qi , and 2 more authors

   Journal of the American Medical Informatics Association, 2021

   Bib HTML

   @article{zhang2021biomedical,
     title = {Biomedical and Clinical English Model Packages for the Stanza Python NLP Library},
     author = {Zhang, Yuhao and Zhang, Yuhui and Qi, Peng and Manning, Christopher D and Langlotz, Curtis P.},
     journal = {Journal of the American Medical Informatics Association},
     volume = {28},
     number = {9},
     pages = {1892--1899},
     year = {2021},
     publisher = {Oxford University Press},
   }

5. NAACL

   Improving Factual Completeness and Consistency of Image-to-Text Radiology Report Generation

   Yasuhide Miura , Yuhao Zhang, Emily Tsai , and 2 more authors

   In Proceedings of the 2021 Conference of the North American Chapter of the Association for Computational Linguistics (NAACL) , 2021

   Bib HTML

   @inproceedings{miura2021improving,
     title = {Improving Factual Completeness and Consistency of Image-to-Text Radiology Report Generation},
     author = {Miura, Yasuhide and Zhang, Yuhao and Tsai, Emily and Langlotz, Curtis and Jurafsky, Dan},
     booktitle = {Proceedings of the 2021 Conference of the North American Chapter of the Association for Computational Linguistics (NAACL)},
     year = {2021},
   }

6. EACL

   Do Syntax Trees Help Pre-trained Transformers Extract Information?

   Devendra Sachan , Yuhao Zhang, Peng Qi , and 1 more author

   In Proceedings of the 16th Conference of the European Chapter of the Association for Computational Linguistics (EACL) , 2021

   Bib HTML

   @inproceedings{sachan2021syntax,
     title = {Do Syntax Trees Help Pre-trained Transformers Extract Information?},
     author = {Sachan, Devendra and Zhang, Yuhao and Qi, Peng and Hamilton, William L},
     booktitle = {Proceedings of the 16th Conference of the European Chapter of the Association for Computational Linguistics (EACL)},
     year = {2021},
   }

2020

1. EMNLP Findings

   Stay Hungry, Stay Focused: Generating Informative and Specific Questions in Information-Seeking Conversations

   Peng Qi , Yuhao Zhang, and Christopher D Manning

   In Proceedings of the 2020 Conference on Empirical Methods in Natural Language Processing (EMNLP): Findings , 2020

   Bib HTML

   @inproceedings{qi2020stay,
     title = {Stay Hungry, Stay Focused: Generating Informative and Specific Questions in Information-Seeking Conversations},
     author = {Qi, Peng and Zhang, Yuhao and Manning, Christopher D},
     booktitle = {Proceedings of the 2020 Conference on Empirical Methods in Natural Language Processing (EMNLP): Findings},
     year = {2020},
   }

2. ACL

   Stanza: A Python Natural Language Processing Toolkit for Many Human Languages

   Peng Qi* , Yuhao Zhang*, Yuhui Zhang , and 2 more authors

   In Proceedings of the 58th Annual Meeting of the Association for Computational Linguistics (ACL): System Demonstrations , 2020

   Bib HTML

   @inproceedings{qi2020stanza,
     title = {Stanza: A Python Natural Language Processing Toolkit for Many Human Languages},
     author = {Qi*, Peng and Zhang*, Yuhao and Zhang, Yuhui and Bolton, Jason and Manning, Christopher D},
     booktitle = {Proceedings of the 58th Annual Meeting of the Association for Computational Linguistics (ACL): System Demonstrations},
     year = {2020},
   }

3. ACL

   Optimizing the Factual Correctness of a Summary: A Study of Summarizing Radiology Reports

   Yuhao Zhang, Derek Merck , Emily Tsai , and 2 more authors

   In Proceedings of the 58th Annual Meeting of the Association for Computational Linguistics (ACL) , 2020

   Bib HTML

   @inproceedings{zhang2020optimizing,
     title = {Optimizing the Factual Correctness of a Summary: A Study of Summarizing Radiology Reports},
     author = {Zhang, Yuhao and Merck, Derek and Tsai, Emily and Manning, Christopher D and Langlotz, Curtis},
     booktitle = {Proceedings of the 58th Annual Meeting of the Association for Computational Linguistics (ACL)},
     year = {2020},
   }

2019

1. AAAI

   Multi-perspective Relevance Matching with Hierarchical ConvNets for Social Media Search

   Jinfeng Rao , Wei Yang , Yuhao Zhang, and 2 more authors

   In Proceedings of the AAAI Conference on Artificial Intelligence , 2019

   Bib

   @inproceedings{rao2019multi,
     title = {Multi-perspective Relevance Matching with Hierarchical Conv{N}ets for Social Media Search},
     author = {Rao, Jinfeng and Yang, Wei and Zhang, Yuhao and Ture, Ferhan and Lin, Jimmy},
     booktitle = {Proceedings of the AAAI Conference on Artificial Intelligence},
     year = {2019},
   }

2. Bioinformatics

   Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning

   Xuan Wang , Yu Zhang , Xiang Ren , and 5 more authors

   Bioinformatics, 2019

   Bib HTML

   @article{wang2019cross,
     title = {Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning},
     author = {Wang, Xuan and Zhang, Yu and Ren, Xiang and Zhang, Yuhao and Zitnik, Marinka and Shang, Jingbo and Langlotz, Curtis and Han, Jiawei},
     journal = {Bioinformatics},
     volume = {35},
     number = {10},
     pages = {1745--1752},
     year = {2019},
     publisher = {Oxford University Press},
   }

2018

1. EMNLP-LOUHI

   Learning to Summarize Radiology Findings

   Yuhao Zhang, Daisy Yi Ding , Tianpei Qian , and 2 more authors

   In Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis (EMNLP-LOUHI) , 2018

   Bib HTML

   @inproceedings{zhang2018learning,
     title = {Learning to Summarize Radiology Findings},
     author = {Zhang, Yuhao and Ding, Daisy Yi and Qian, Tianpei and Manning, Christopher D and Langlotz, Curtis P},
     booktitle = {Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis (EMNLP-LOUHI)},
     year = {2018},
   }

2. EMNLP

   Graph Convolution over Pruned Dependency Trees Improves Relation Extraction

   Yuhao Zhang*, Peng Qi* , and Christopher D Manning

   In Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing (EMNLP) , 2018

   Bib HTML

   @inproceedings{zhang2018graph,
     title = {Graph Convolution over Pruned Dependency Trees Improves Relation Extraction},
     author = {Zhang*, Yuhao and Qi*, Peng and Manning, Christopher D},
     booktitle = {Proceedings of the 2018 Conference on Empirical Methods in Natural Language Processing (EMNLP)},
     year = {2018},
   }

3. EMNLP-CoNLL

   Universal Dependency Parsing from Scratch

   Peng Qi* , Timothy Dozat* , Yuhao Zhang*, and 1 more author

   In Proceedings of the CoNLL 2018 Shared Task: Multilingual Parsing from Raw Text to Universal Dependencies , 2018

   Bib HTML

   @inproceedings{qi2018universal,
     title = {Universal Dependency Parsing from Scratch},
     author = {Qi*, Peng and Dozat*, Timothy and Zhang*, Yuhao and Manning, Christopher D},
     booktitle = {Proceedings of the CoNLL 2018 Shared Task: Multilingual Parsing from Raw Text to Universal Dependencies},
     year = {2018},
   }

4. JAMIA

   Expanding a Radiology Lexicon Using Contextual Patterns in Radiology Reports

   Bethany Percha , Yuhao Zhang, Selen Bozkurt , and 3 more authors

   Journal of the American Medical Informatics Association, 2018

   Bib

   @article{percha2018expanding,
     title = {Expanding a Radiology Lexicon Using Contextual Patterns in Radiology Reports},
     author = {Percha, Bethany and Zhang, Yuhao and Bozkurt, Selen and Rubin, Daniel and Altman, Russ B and Langlotz, Curtis P},
     journal = {Journal of the American Medical Informatics Association},
     volume = {25},
     number = {6},
     pages = {679--685},
     year = {2018},
     publisher = {Oxford University Press},
   }

2017

1. EMNLP

   Position-aware Attention and Supervised Data Improve Slot Filling

   Yuhao Zhang, Victor Zhong , Danqi Chen , and 2 more authors

   In Proceedings of the 2017 Conference on Empirical Methods in Natural Language Processing (EMNLP) , 2017

   Bib HTML

   @inproceedings{zhang2017position,
     title = {Position-aware Attention and Supervised Data Improve Slot Filling},
     author = {Zhang, Yuhao and Zhong, Victor and Chen, Danqi and Angeli, Gabor and Manning, Christopher D},
     booktitle = {Proceedings of the 2017 Conference on Empirical Methods in Natural Language Processing (EMNLP)},
     year = {2017},
     dataset = {https://nlp.stanford.edu/projects/tacred/},
   }

2. TAC

   Stanford at TAC KBP 2017: Building a Trilingual Relational Knowledge Graph.

   Arun Tejasvi Chaganty , Ashwin Paranjape , Jason Bolton , and 7 more authors

   In Text Analysis Conference , 2017

   Bib HTML

   @inproceedings{chaganty2017stanford,
     title = {Stanford at {TAC} {KBP} 2017: Building a Trilingual Relational Knowledge Graph.},
     author = {Chaganty, Arun Tejasvi and Paranjape, Ashwin and Bolton, Jason and Lamm, Matthew and Lei, Jinhao and See, Abigail and Clark, Kevin and Zhang, Yuhao and Qi, Peng and Manning, Christopher D},
     booktitle = {Text Analysis Conference},
     year = {2017},
   }

2016

1. TAC

   Stanford at TAC KBP 2016: Sealing Pipeline Leaks and Understanding Chinese.

   Yuhao Zhang, Arun Tejasvi Chaganty , Ashwin Paranjape , and 4 more authors

   In Text Analysis Conference , 2016

   Bib HTML

   @inproceedings{zhang2016stanford,
     title = {Stanford at {TAC} {KBP} 2016: Sealing Pipeline Leaks and Understanding {C}hinese.},
     author = {Zhang, Yuhao and Chaganty, Arun Tejasvi and Paranjape, Ashwin and Chen, Danqi and Bolton, Jason and Qi, Peng and Manning, Christopher D},
     booktitle = {Text Analysis Conference},
     year = {2016},
   }

2015

1. CHI

   Helping Users Bootstrap Ontologies: An Empirical Investigation

   Yuhao Zhang, Tania Tudorache , Matthew Horridge , and 1 more author

   In Proceedings of the 33rd Annual ACM Conference on Human Factors in Computing Systems (CHI) , 2015

   Bib

   @inproceedings{zhang2015helping,
     title = {Helping Users Bootstrap Ontologies: An Empirical Investigation},
     author = {Zhang, Yuhao and Tudorache, Tania and Horridge, Matthew and Musen, Mark A},
     booktitle = {Proceedings of the 33rd Annual ACM Conference on Human Factors in Computing Systems (CHI)},
     year = {2015},
   }